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AT5G38770.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.887
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : glutamine dumper 7
Curator
Summary (TAIR10)
Encodes a member of the GDU (glutamine dumper) family proteins involved in amino acid export: At4g31730 (GDU1), At4g25760 (GDU2), At5g57685 (GDU3), At2g24762 (GDU4), At5g24920 (GDU5), At3g30725 (GDU6) and At5g38770 (GDU7).
Computational
Description (TAIR10)
glutamine dumper 7 (GDU7); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:19119EMBL:AB011478EMBL:CP002688EMBL:DQ447014
EMBL:DQ653328EnsemblPlants:AT5G38770EnsemblPlants:AT5G38770.1entrez:833868
GeneID:833868Genevisible:Q3E8L0GO:GO:0006865GO:GO:0016021
GO:GO:0080143Gramene:AT5G38770.1hmmpanther:PTHR33228hmmpanther:PTHR33228:SF3
IntAct:Q3E8L0KEGG:ath:AT5G38770OMA:AMAYACYPaxDb:Q3E8L0
Pfam:Q3E8L0PhylomeDB:Q3E8L0PRIDE:Q3E8L0PRO:PR:Q3E8L0
ProteinModelPortal:Q3E8L0Proteomes:UP000006548RefSeq:NP_198693.1STRING:3702.AT5G38770.1
TAIR:AT5G38770tair10-symbols:AtGDU7tair10-symbols:GDU7TMHMM:TMhelix
UniGene:At.55228UniProt:Q3E8L0
Coordinates (TAIR10) chr5:+:15526114..15526407
Molecular Weight (calculated) 10819.40 Da
IEP (calculated) 8.50
GRAVY (calculated) 0.00
Length 97 amino acids
Sequence (TAIR10)
(BLAST)
1: MSLHRDSMVP VNSRLENMDS PILSKICAWG VMLGLFALSL FAMAYACYHK QTSNSCIEEK QGKKQVLKPL DMEPKIVVIM AGNENPTFFA KPTQINA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)