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AT5G14470.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : GHMP kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
GHMP kinase family protein; FUNCTIONS IN: kinase activity, phosphotransferase activity, alcohol group as acceptor, galactokinase activity, ATP binding; INVOLVED IN: metabolic process, phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: inflorescence meristem, flower, carpel, pollen tube; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: glucuronokinase G (TAIR:AT3G01640.1); Has 369 Blast hits to 369 proteins in 134 species: Archae - 34; Bacteria - 179; Metazoa - 12; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink).
Protein Annotations
BRENDA:2.7.1.43DNASU:831298EC:2.7.1.43eggNOG:ENOG410IE40
eggNOG:ENOG410XWREEMBL:AL163817EMBL:BT020237EMBL:BT020504
EMBL:CP002688EnsemblPlants:AT5G14470EnsemblPlants:AT5G14470.1entrez:831298
Gene3D:3.30.230.10Gene3D:3.30.70.890GeneID:831298Genevisible:Q9LY82
GO:GO:0005524GO:GO:0005737GO:GO:0005975GO:GO:0046872
GO:GO:0047940Gramene:AT5G14470.1gramene_plant_reactome:1119431gramene_plant_reactome:6874438
hmmpanther:PTHR10457hmmpanther:PTHR10457:SF13HOGENOM:HOG000243720InParanoid:Q9LY82
InterPro:IPR006204InterPro:IPR006206InterPro:IPR013750InterPro:IPR014721
InterPro:IPR020568KEGG:00052+2.7.1.6KEGG:00520+2.7.1.6KEGG:ath:AT5G14470
KO:K16190OMA:WAWAKLEPANTHER:PTHR10457PaxDb:Q9LY82
Pfam:PF00288Pfam:PF08544Pfam:Q9LY82PhylomeDB:Q9LY82
PIR:T48620PRINTS:PR00959PRO:PR:Q9LY82ProteinModelPortal:Q9LY82
Proteomes:UP000006548RefSeq:NP_196951.3STRING:3702.AT5G14470.1SUPFAM:SSF54211
SUPFAM:SSF55060TAIR:AT5G14470UniGene:At.50456unipathway:UPA00214
UniProt:Q9LY82
Coordinates (TAIR10) chr5:-:4663029..4664657
Molecular Weight (calculated) 40863.30 Da
IEP (calculated) 7.25
GRAVY (calculated) -0.16
Length 366 amino acids
Sequence (TAIR10)
(BLAST)
001: MDPNPKPAIS GKDNGVFEHR SFARIGFLGN PSDVYFGRTI SFTIGNFWAW AKLEPSDHLL IKPHPFHDLV QFDSLDNLVY RLENDGYYGG VRLLMAICKV
101: FRNYCKENGI QLHDKNFTLS YDTNIPRQTG LSGSSAIVSA ALSCLLDFYN VRQSIRIEVR PNLILNAEKE LGIVAGLQDR VAQVYGGGLV HMDFSKEHMD
201: KVGYGIYTIM DINLLPPLHL IYAENPSDSG KVHSTVRRRW LDGDEFIISS MAEIAKLAEE GRTALLKKDY SNLKELMNRN FDLRRSMFGD ECLGAMNIEM
301: VEVARKIGAA AKFTGSGGAV VVFCPEGPSQ VKLLEEECRK SGFIVEPVKL VPTRLSSSDI KTLSKT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)