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AT5G07720.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.394
cytosol 0.177
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Galactosyl transferase GMA12/MNN10 family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Galactosyl transferase GMA12/MNN10 family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: xyloglucan xylosyltransferase 5 (TAIR:AT1G74380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G07720-MONOMERCAZy:GT34EC:2.4.-.-EC:2.4.2.39
eggNOG:ENOG410XSJSeggNOG:KOG4748EMBL:AB010070EMBL:AJ245573
EMBL:AK227750EMBL:BT010365EMBL:CP002688EMBL:KJ138699
EnsemblPlants:AT5G07720EnsemblPlants:AT5G07720.1entrez:830665ExpressionAtlas:Q9LF80
GeneID:830665Genevisible:Q9LF80GO:GO:0000139GO:GO:0010411
GO:GO:0016021GO:GO:0033843Gramene:AT5G07720.1hmmpanther:PTHR31311
hmmpanther:PTHR31311:SF4HOGENOM:HOG000239436InParanoid:Q9LF80InterPro:IPR008630
KEGG:ath:AT5G07720KO:K08238OMA:KETWMEKPaxDb:Q9LF80
Pfam:PF05637Pfam:Q9LF80PhylomeDB:Q9LF80PRIDE:Q9LF80
PRO:PR:Q9LF80ProteinModelPortal:Q9LF80Proteomes:UP000006548RefSeq:NP_196389.1
SMR:Q9LF80STRING:3702.AT5G07720.1TAIR:AT5G07720UniGene:At.67209
UniGene:At.9097UniProt:Q0WT14UniProt:Q9LF80
Coordinates (TAIR10) chr5:+:2455757..2457130
Molecular Weight (calculated) 52370.10 Da
IEP (calculated) 7.82
GRAVY (calculated) -0.37
Length 457 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKEDGFRTQ KRVSTASSAA AGVLPTTMAS GGVRRPPPRG RQIQKTFNNV KMTILCGFVT ILVLRGTIGI NFGTSDADVV NQNIIEETNR LLAEIRSDSD
101: PTDSNEPPDS DLDLNMTYTL GPKITNWDQK RKLWLTQNPD FPSFINGKAK VLLLTGSPPK PCDNPIGDHY LLKSVKNKID YCRIHGIEIV YNMAHLDKEL
201: AGYWAKLPMI RRLMLSHPEI EWIWWMDSDA LFTDMVFEIP LSRYENHNLV IHGYPDLLFD QKSWIALNTG SFLFRNCQWS LDLLDAWAPM GPKGPIREEA
301: GKILTANLKG RPAFEADDQS ALIYLLLSQK ETWMEKVFVE NQYYLHGFWE GLVDKYEEMM EKYHPGLGDE RWPFITHFVG CKPCGSYADY AVERCLKSME
401: RAFNFADNQV LKLYGFGHRG LLSPKIKRIR NETTFPLKFV DRFDIRRTTP LKIEARS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)