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AT5G03230.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function, DUF584
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT5G60680.1); Has 326 Blast hits to 326 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 324; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JGYHeggNOG:ENOG41118WJEMBL:AB005240EMBL:AF370275
EMBL:AL163002EMBL:AY142539EMBL:CP002688EnsemblPlants:AT5G03230
EnsemblPlants:AT5G03230.1entrez:831900GeneID:831900Gramene:AT5G03230.1
hmmpanther:PTHR33083hmmpanther:PTHR33083:SF10HOGENOM:HOG000238243IntAct:Q9LYW2
InterPro:IPR007608KEGG:ath:AT5G03230OMA:WEKIGFQPfam:PF04520
PhylomeDB:Q9LYW2PIR:T48344Proteomes:UP000006548RefSeq:NP_195943.1
STRING:3702.AT5G03230.1TAIR:AT5G03230UniGene:At.1595UniProt:Q9LYW2
Coordinates (TAIR10) chr5:+:769636..770136
Molecular Weight (calculated) 19005.00 Da
IEP (calculated) 6.04
GRAVY (calculated) -1.10
Length 166 amino acids
Sequence (TAIR10)
(BLAST)
001: MASRKLFFVK PKYIYPEPKP EMSDENVFEF DESDIHNLGD HQLPNSFDAK RSISISRLRR KPTKTGDSGN REITKTGSLP VNIPDWSKIL KSEYRGHAIP
101: DDDSDDDDED DDDSNDGGRR MIPPHEYLAR RRGSSFTVHE GIGGTAKGRD LRRLRNAIWE KIGFQD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)