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AT4G36160.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : NAC domain containing protein 76
Curator
Summary (TAIR10)
Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.
Computational
Description (TAIR10)
NAC domain containing protein 76 (NAC076); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: vascular related NAC-domain protein 1 (TAIR:AT2G18060.1); Has 3021 Blast hits to 3016 proteins in 76 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 3020; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IHWYeggNOG:ENOG410YBF6EMBL:AL022141EMBL:AL161588
EMBL:CP002687EnsemblPlants:AT4G36160EnsemblPlants:AT4G36160.1entrez:829773
GeneID:829773Genevisible:O65508GO:GO:0003700GO:GO:0005634
GO:GO:0006351GO:GO:0006355GO:GO:0007275GO:GO:0043565
GO:GO:0048759GO:GO:0071555GO:GO:1901348Gramene:AT4G36160.1
hmmpanther:PTHR31989hmmpanther:PTHR31989:SF7HOGENOM:HOG000237406InParanoid:O65508
IntAct:O65508InterPro:IPR003441KEGG:ath:AT4G36160OMA:IGLNFIH
PaxDb:O65508Pfam:O65508Pfam:PF02365Pfscan:PS51005
PhylomeDB:O65508PIR:T04585PRIDE:O65508PRO:PR:O65508
PROSITE:PS51005ProteinModelPortal:O65508Proteomes:UP000006548RefSeq:NP_195339.1
SMR:O65508STRING:3702.AT4G36160.1SUPFAM:SSF101941TAIR:AT4G36160
tair10-symbols:ANAC076tair10-symbols:NAC076tair10-symbols:VND2UniGene:At.50400
UniProt:O65508
Coordinates (TAIR10) chr4:-:17110877..17112891
Molecular Weight (calculated) 43519.10 Da
IEP (calculated) 6.61
GRAVY (calculated) -0.80
Length 377 amino acids
Sequence (TAIR10)
(BLAST)
001: MESVDQSCSV PPGFRFHPTD EELVGYYLRK KVASQKIDLD VIRDIDLYRI EPWDLQESCR IGYEERNEWY FFSHKDKKYP TGTRTNRATM AGFWKATGRD
101: KAVYDKSKLI GMRKTLVFYK GRAPNGQKTD WIMHEYRLES DENAPPQEEG WVVCRAFKKK PMTGQAKNTE TWSSSYFYDE LPSGVRSVTE PLNYVSKQKQ
201: NVFAQDLMFK QELEGSDIGL NFIHCDQFIQ LPQLESPSLP LTKRPVSLTS ITSLEKNKNI YKRHLIEEDV SFNALISSGN KDKKKKKTSV MTTDWRALDK
301: FVASQLMSQE DGVSGFGGHH EEDNNKIGHY NNEESNNKGS VETASSTLLS DREEENRFIS GLLCSNLDYD LYRDLHV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)