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AT4G36030.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.789
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : armadillo repeat only 3
Curator
Summary (TAIR10)
Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules.
Computational
Description (TAIR10)
armadillo repeat only 3 (ARO3); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: armadillo repeat only 2 (TAIR:AT5G66200.1); Has 616 Blast hits to 538 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 129; Plants - 303; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JX54eggNOG:ENOG41104AFEMBL:AK117432EMBL:AL022373
EMBL:AL161588EMBL:BT004921EMBL:CP002687EnsemblPlants:AT4G36030
EnsemblPlants:AT4G36030.1entrez:829759Gene3D:1.25.10.10GeneID:829759
Gramene:AT4G36030.1hmmpanther:PTHR23315hmmpanther:PTHR23315:SF60HOGENOM:HOG000239900
InterPro:IPR000225InterPro:IPR011989InterPro:IPR016024KEGG:ath:AT4G36030
ncoils:CoilOMA:ICRVITEPfam:PF00514PhylomeDB:O65640
PIR:T05495Proteomes:UP000006548RefSeq:NP_195327.1SMART:SM00185
SMR:O65640STRING:3702.AT4G36030.1SUPFAM:SSF48371TAIR:AT4G36030
tair10-symbols:ARO3UniGene:At.31360UniProt:O65640
Coordinates (TAIR10) chr4:-:17045084..17047096
Molecular Weight (calculated) 73070.60 Da
IEP (calculated) 5.14
GRAVY (calculated) -0.14
Length 670 amino acids
Sequence (TAIR10)
(BLAST)
001: MGDLAKQILS RPIQLADQVV KAGDEATINK QECADIKSKT EKLAALLRQA ARASSDLYER PTRRILDDTE NVLEKALTMV QRCRDDGYIM RLFNIIPAAA
101: FRKMISQLEN SVGDVSWLLR VSTPAGNDDD EGFGYLGLPP IAANEPILCL IWEQIAVLMT GSPEDKSDAA ASLASLARDN DRYVKLIVEE GGVNPLLKLV
201: KEGKIDGQEN AARTIGLLGR DPESVEHMIQ LGVCSVLSSI LKEGSMKVQA VVAWAVSELV SGNHAKCQEL FAQNNVIRLL VSHLAFETVQ EHSKYAVVAG
301: RATSMHHAVV MASKISSSKE NLPALNEEED DDNHIGVSSP MTNQMHSIVA TTMAMKAVGS GSKSNLSSRF VTGDDDKPPE KIPEKSYSMS SQIKAYGSIA
401: HQSRNASVTR GRELEDPVTK TYMKAMAARA LWKLAVGNSS ICRVITESRA LLCFAVLLDK GDEETKYNTA MAIMEITAVA EENADLRRSA FRRTSPACKA
501: VVDQLFRIVE NADAGSDLLI PCVRSIGNLA RTFKSAETHM IVPLVKLLDD GEPDLAAEVA IALAKFATED NFLGKEHSRT IIEAGGSKLL VQLAYFGENG
601: AQIPAMVLLS YVAMNVPDSE QLAKDEVLTV LEWSSKQANV LEDEDMEALL YEAKSRLELY QSRGSRGFHL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)