AT4G32780.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.878 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : phosphoinositide binding | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
phosphoinositide binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF828 (InterPro:IPR008546); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT5G43870.1); Has 405 Blast hits to 233 proteins in 34 species: Archae - 2; Bacteria - 17; Metazoa - 10; Fungi - 2; Plants - 172; Viruses - 6; Other Eukaryotes - 196 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:15808926..15810907 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 28981.30 Da | ||||||||||||||||||||||||
| IEP (calculated) | 6.52 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.26 | ||||||||||||||||||||||||
| Length | 270 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTSLHKTLFT QNPTTLDQLM MCHTGRDNSW KKLENIDEEG PSTVAREVRT ALPPETPTEM MEFLGRSWSI SAVELTRAFF NNSTADTNSF LLSTIVNTNK 101: EDREDEEDST SMASSRDLLL PHVGNKTSPP ITPRTGREMK HLYKSMIRGR TMGRRLKDQK EKKKQETRTR NAEIHAAVSV AGVAAVVAAT AASNAIAAAE 201: DAVESTTVAA AMASAAALIA SHCIEIAGEI GAGYNQIATA VSSATNARTN GDIMALTASA ATGIIYCFLA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)