AT4G19200.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.668 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : proline-rich family protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
proline-rich family protein; Has 23677 Blast hits to 12773 proteins in 953 species: Archae - 9; Bacteria - 5550; Metazoa - 10820; Fungi - 2264; Plants - 2677; Viruses - 157; Other Eukaryotes - 2200 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:10499277..10500390 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 17745.60 Da | ||||||||||||||||||||||||
| IEP (calculated) | 10.18 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.91 | ||||||||||||||||||||||||
| Length | 179 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGGGKDKHHD EQEKGFHGFP GGGHYPPAQG GYPPQGYPPQ QGYPPAGGYP PAGYPPGAYP AAPGGYPPAP GGYPPAGYPA PGAHHSGHSG GGLGGMIAGA 101: AGAAAAAYGA HHVGHASHNP YGHAVGHGGY GHAPAHGFGH GGHGKFKHGK HGGKFKHGKH GKHGKHGMFG GGGKFKKWK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)