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AT3G60480.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 17 Blast hits to 17 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J498eggNOG:ENOG410Y2REEMBL:AK227521EMBL:AY088323
EMBL:BT025586EMBL:CP002686EnsemblPlants:AT3G60480EnsemblPlants:AT3G60480.1
entrez:825219GeneID:825219GO:GO:0016021Gramene:AT3G60480.1
hmmpanther:PTHR37744hmmpanther:PTHR37744:SF1KEGG:ath:AT3G60480OMA:LMPFKAF
PhylomeDB:Q8L9P2Proteomes:UP000006548RefSeq:NP_567100.1TAIR:AT3G60480
TMHMM:TMhelixUniGene:At.34440UniProt:Q8L9P2
Coordinates (TAIR10) chr3:-:22347680..22348208
Molecular Weight (calculated) 11734.00 Da
IEP (calculated) 6.52
GRAVY (calculated) 0.04
Length 111 amino acids
Sequence (TAIR10)
(BLAST)
001: MEEQNAGTGA GESSLLDGSG HWWWALGSGA QIMWGIRLIR RGYAGDVRLM PLKAFGVASL FVGSLATSSV ALVRATGIHT VQDAIDLGAN IRTNLGVTPQ
101: IPDKQITERD G
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)