AT3G60440.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.962 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Phosphoglycerate mutase family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Phosphoglycerate mutase family protein; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), PRIB5 (InterPro:IPR012398); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G60450.1); Has 266 Blast hits to 262 proteins in 108 species: Archae - 0; Bacteria - 57; Metazoa - 8; Fungi - 71; Plants - 68; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:22337820..22339145 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 32338.50 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.40 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||
| Length | 291 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MYTTITSNVV SKVTAAAATI RATMESAKSK NPDSYQNILM MRHGDRIDKI DPLWLDTAAR PWDPPLVQDG MVRAFQTGQR IRSQIQFPIH RVFVSPFIRC 101: IQTASEVIAA LSAVDFDPNA TSSKDVTSID KYKLKVSIEF GLSEMLNSIA IKPEIAPKDG KFDFMISELE AIFPDGMVDH SVDPVYKEMP QWEETVEGCT 201: DRFLSLIKTL ADKYPSENLL LVTHGEGVRT TFATFKGVHV YDVEYCGCAE LRRQVSSKDG STKAGDFEVI TSLSQCGIKY HSLSTTDQTS A |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)