AT3G58470.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.912 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : nucleic acid binding;methyltransferases | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
nucleic acid binding;methyltransferases; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, eukaryotic (InterPro:IPR019369), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052); Has 287 Blast hits to 287 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 79; Plants - 48; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:21627070..21628507 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 28014.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.31 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.33 | ||||||||||||||||||||||||||||||||
| Length | 248 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEKEDELQKL NGQVSAPRDG DVEDDDPLVL SSQALAALRE FLADQNKTVA STPPASSVAG GEESDKVELV TEDWRLSQFW YEPETAETVA DEVVTLSQRI 101: PGCRVACIAC PTLYVYLKKR DPSLQVQLLE YDMRFERYGK EFTFYDYNEP EDLPLQLKHC FHIIVADPPY LSRECLERVS QTILFLASPV DSLLLLLTGE 201: VQREHAAELL GVRPCVFKPH HSSKLGNEFR LFISYDPGTR LGGLEEDS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)