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AT3G51300.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.827
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : RHO-related protein from plants 1
Curator
Summary (TAIR10)
Encodes a pollen-specific Rop GTPase, member of the Rho family of small GTP binding proteins that interacts with RIC3 and RIC4 to control tip growth in pollen tubes. These three proteins promote the proper targeting of exocytic vesicles in the pollen tube tip. ROP1 activity is regulated by the REN1 GTPase activator protein.
Computational
Description (TAIR10)
RHO-related protein from plants 1 (ROP1); CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: Arabidopsis RAC-like 1 (TAIR:AT2G17800.2); Has 24331 Blast hits to 24300 proteins in 680 species: Archae - 9; Bacteria - 65; Metazoa - 12719; Fungi - 3503; Plants - 2700; Viruses - 20; Other Eukaryotes - 5315 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G51300-MONOMERBioGrid:9611eggNOG:COG1100eggNOG:KOG0393
EMBL:AF085480EMBL:AF375412EMBL:AL132980EMBL:AY066054
EMBL:CP002686EMBL:U49971EnsemblPlants:AT3G51300EnsemblPlants:AT3G51300.1
entrez:824293Gene3D:3.40.50.300GeneID:824293Genevisible:P92978
GO:GO:0003924GO:GO:0005525GO:GO:0005634GO:GO:0005730
GO:GO:0005737GO:GO:0005819GO:GO:0005886GO:GO:0007264
GO:GO:0009524GO:GO:0009860GO:GO:0017157GO:GO:0030833
GO:GO:0030834GO:GO:0032794GO:GO:0045177GO:GO:0051650
Gramene:AT3G51300.1hmmpanther:PTHR24072hmmpanther:PTHR24072:SF179HOGENOM:HOG000233974
InParanoid:P92978IntAct:P92978InterPro:IPR001806InterPro:IPR005225
InterPro:IPR027417KEGG:ath:AT3G51300KO:K04392OMA:ACAKEIK
PaxDb:P92978Pfam:P92978Pfam:PF00071Pfscan:PS51420
PhylomeDB:P92978PIR:T45761PRO:PR:P92978PROSITE:PS51420
ProteinModelPortal:P92978Proteomes:UP000006548Reactome:R-ATH-194840Reactome:R-ATH-198203
Reactome:R-ATH-392451Reactome:R-ATH-5666185RefSeq:NP_190698.1SMR:P92978
STRING:3702.AT3G51300.1SUPFAM:SSF52540TAIR:AT3G51300tair10-symbols:ARAC11
tair10-symbols:ATRAC11tair10-symbols:ATROP1tair10-symbols:ROP1tair10-symbols:ROP1AT
TIGRfam:TIGR00231TIGRFAMs:TIGR00231UniGene:At.28445UniProt:P92978
Coordinates (TAIR10) chr3:+:19043197..19044215
Molecular Weight (calculated) 21620.00 Da
IEP (calculated) 9.54
GRAVY (calculated) -0.13
Length 197 amino acids
Sequence (TAIR10)
(BLAST)
001: MSASRFVKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVVVN GSTVNLGLWD TAGQEDYNRL RPLSYRGADV FILAFSLISK ASYENVSKKW
101: IPELKHYAPG VPIVLVGTKL DLRDDKQFFI DHPGAVPITT AQGEELRKQI GAPTYIECSS KTQENVKAVF DAAIRVVLQP PKQKKKKSKA QKACSIL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)