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AT3G22810.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.674
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Protein of unknown function DUF828 (InterPro:IPR008546), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT4G14740.2); Has 431 Blast hits to 261 proteins in 42 species: Archae - 3; Bacteria - 14; Metazoa - 18; Fungi - 2; Plants - 219; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IGD5eggNOG:ENOG4110M78EMBL:AB022223EMBL:CP002686
EnsemblPlants:AT3G22810EnsemblPlants:AT3G22810.1entrez:821852GeneID:821852
Gramene:AT3G22810.1hmmpanther:PTHR31351hmmpanther:PTHR31351:SF4HOGENOM:HOG000237680
InterPro:IPR008546InterPro:IPR013666KEGG:ath:AT3G22810OMA:CKSEREY
Pfam:PF05703Pfam:PF08458PhylomeDB:Q9LUI0Proteomes:UP000006548
RefSeq:NP_188920.1STRING:3702.AT3G22810.1TAIR:AT3G22810UniGene:At.53442
UniProt:Q9LUI0
Coordinates (TAIR10) chr3:+:8068595..8071559
Molecular Weight (calculated) 51269.80 Da
IEP (calculated) 9.54
GRAVY (calculated) -0.33
Length 472 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKPVFAPWR SDQVFRPPET PLEPMEFLSR SWSVSAHEVS KALTPSQQLL SKASIENTTV ILEEPIAAGE TETEDNSFVS GNPFSFACSE TSQMVMDRIL
101: SQSQEVSPRT SGRLSHSSGP LNGSLTDSPP ISPHQVDDIK QFCRSNNNFN SQYRSTGTTP GPITATTTQS KTVGRWLKDR REKKKEEMRA HNAQIHAAVS
201: VAGVAAAVAA IAAATAASSS AGKDENMAKT DMAVASAATL VAAQCVEAAE VMGAERDHLA SVVSSAVNVR SAGDIMTLTA GAATALRGVA TLKARAMKEV
301: WHIASVIPMD KGINLGGCSN VNGNGSYVSS SSSHSGEFLV EDNFLGHCNR EWLARGGQLL KRTRKGDLHW KIVSVYINRL NQVILKMKSR HVGGTFTKKN
401: KNVVIDVIKN VQAWPGRHLL EGGEDLRYFG LKTVPRGIVE FQCKSQREYE MWTQGVSRLI AVAAERNNRY RI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)