AT3G15220.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytoplasm, spindle; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G53165.2); Has 133641 Blast hits to 131568 proteins in 4406 species: Archae - 196; Bacteria - 15456; Metazoa - 49688; Fungi - 12950; Plants - 32844; Viruses - 666; Other Eukaryotes - 21841 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:5126899..5131752 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 76322.30 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.33 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.66 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 690 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDDVAGLQEA AGARFSQIEL IGRGSFGDVY KAFDKDLNKE VAIKVIDLEE SEDEIEDIQK EISVLSQCRC PYITEYYGSY LHQTKLWIIM EYMAGGSVAD 101: LLQSNNPLDE TSIACITRDL LHAVEYLHNE GKIHRDIKAA NILLSENGDV KVADFGVSAQ LTRTISRRKT FVGTPFWMAP EVIQNSEGYN EKADIWSLGI 201: TVIEMAKGEP PLADLHPMRV LFIIPRETPP QLDEHFSRQV KEFVSLCLKK APAERPSAKE LIKHRFIKNA RKSPKLLERI RERPKYQVKE DEETPRNGAK 301: APVESSGTVR IARDERSQGA PGYSFQGNTV KNAGWDFTVG GSQSIGTVRA LKPPQARERR QEVSPNRISQ RTTRPSGNQW SSATGSTISE ASEGGFVRRH 401: PFQNDHEDGF HEEDDSSLSG SGTVVIRTPR SSQSSSVFRE PSSGSSGRYA AFDDASASGT VVVRGQYDDS GSPRTPKSRL GIQERTSSAS EDSNANLAEA 501: KAALDAGFRR GKARERLGMG NNNNDGKVNR RREQMADDSD YSRNSGDKSS KQKVVPRSEQ VSDEEDDSIW ESLPASLSVL LIPSLKEALG DDSKESTVRT 601: VSRSLVMMER EKPGSCEAFV AKLIELLGSS KEASVKELHD MAVCVFAKTT PDNAENKMKQ ANKEFSSNTN VSPLGRFLLS RWLGQSSRDL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)