suba logo
AT3G14700.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
nucleus 0.681
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : SART-1 family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
SART-1 family; CONTAINS InterPro DOMAIN/s: SART-1 protein (InterPro:IPR005011); BEST Arabidopsis thaliana protein match is: SART-1 family (TAIR:AT5G16780.1); Has 296 Blast hits to 296 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 96; Plants - 41; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
Protein Annotations
DNASU:820698eggNOG:ENOG410J67KeggNOG:ENOG410YAI3EMBL:AK228034
EMBL:BT004775EMBL:CP002686EnsemblPlants:AT3G14700EnsemblPlants:AT3G14700.1
entrez:820698GeneID:820698GO:GO:0000398Gramene:AT3G14700.1
hmmpanther:PTHR14152hmmpanther:PTHR14152:SF5HOGENOM:HOG000147085InterPro:IPR005011
KEGG:ath:AT3G14700KO:K11984ncoils:CoilOMA:QMESSER
PANTHER:PTHR14152:SF5Pfam:PF03343Proteomes:UP000006548Reactome:R-ATH-72163
RefSeq:NP_188088.1STRING:3702.AT3G14700.1TAIR:AT3G14700UniGene:At.39187
UniProt:Q84VW3
Coordinates (TAIR10) chr3:+:4940708..4941322
Molecular Weight (calculated) 23541.10 Da
IEP (calculated) 10.32
GRAVY (calculated) -1.12
Length 204 amino acids
Sequence (TAIR10)
(BLAST)
001: MSQSKVAMKK DSMRKNKKLV INIALDKEVL ASRVEADHDL GSVRDEKERL ESSERRREVC SKAEDIVDKA IDNHSRVRGD GIMREADVGT GLSGALNRLR
101: EQGTFKEEGK VVGVKDNNHE DDRFKDRFKD IQIQRVNKWG RIMTEKEAYR SLCHGFHGKG PGKKKQEKQR KKHEDKSKQM ESSERSVERI REIHAISKTP
201: YIVL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)