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AT3G09922.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.648
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : induced by phosphate starvation1
Curator
Summary (TAIR10)
AF236376 Arabidopsis thaliana IPS1 mRNA, complete sequence
Computational
Description (TAIR10)
INDUCED BY PHOSPHATE STARVATION1 (IPS1); Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink).
Protein Annotations
EMBL:CP002686EnsemblPlants:AT3G09922EnsemblPlants:AT3G09922.1entrez:820152
GeneID:820152GO:GO:0016021Gramene:AT3G09922.1KEGG:ath:AT3G09922
PaxDb:Q3E7J0ProteinModelPortal:Q3E7J0Proteomes:UP000006548RefSeq:NP_850550.1
STRING:3702.AT3G09922.1TAIR:AT3G09922tair10-symbols:ATIPS1tair10-symbols:IPS1
TMHMM:TMhelixUniGene:At.47056UniGene:At.70663UniProt:Q3E7J0
Coordinates (TAIR10) chr3:+:3051171..3051413
Molecular Weight (calculated) 9011.14 Da
IEP (calculated) 8.41
GRAVY (calculated) 0.56
Length 80 amino acids
Sequence (TAIR10)
(BLAST)
1: RLQKADSDCE FCLSPSRNWA TSILWQASVP LGISRLCIFN FVILSLFSML CFSSLCLGCT HSRALCVLCV RNKKIFGFEN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)