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AT2G40450.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.798
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : BTB/POZ domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT5G48510.1); Has 2290 Blast hits to 2270 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 1375; Fungi - 7; Plants - 741; Viruses - 43; Other Eukaryotes - 124 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XQV8eggNOG:KOG1987EMBL:AC002336EMBL:CP002685
EnsemblPlants:AT2G40450EnsemblPlants:AT2G40450.1entrez:818639GeneID:818639
GO:GO:0016567Gramene:AT2G40450.1hmmpanther:PTHR24413hmmpanther:PTHR24413:SF131
HOGENOM:HOG000029690InterPro:IPR000210InterPro:IPR011333KEGG:ath:AT2G40450
KO:K10523OMA:KLFVVNHPaxDb:O22890Pfam:O22890
Pfam:PF00651Pfscan:PS50097PhylomeDB:O22890PIR:F84829
PRIDE:O22890PRO:PR:O22890PROSITE:PS50097ProteinModelPortal:O22890
Proteomes:UP000006548RefSeq:NP_181577.1SMART:SM00225SMR:O22890
STRING:3702.AT2G40450.1SUPFAM:SSF54695TAIR:AT2G40450UniGene:At.53086
UniPathway:UPA00143UniProt:O22890
Coordinates (TAIR10) chr2:-:16892024..16892790
Molecular Weight (calculated) 23505.10 Da
IEP (calculated) 7.11
GRAVY (calculated) -0.18
Length 209 amino acids
Sequence (TAIR10)
(BLAST)
001: MATQSNKEAF LGGFKKLLNE QWQADVRLKA GDSDETTSIF AHKLVLVARS EVFKKILESD EFKASSKQME TVTLSEMKHE ELEAFVEFIY RVDGSICSAS
101: LKKHARSLFH AADKYEIPHL RDLCRNELIS SLNSSNALSI LELAQIPFDK ALNDPAFTTI ITNISTIASG DEFKLFVANH PNLAVDIMKA SITRLSTSRK
201: ICGYCNRYY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)