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AT2G39110.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.493
plasma membrane 0.383
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G09830.2); Has 116486 Blast hits to 115184 proteins in 3894 species: Archae - 105; Bacteria - 13150; Metazoa - 42637; Fungi - 10037; Plants - 33183; Viruses - 432; Other Eukaryotes - 16942 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G39110-MONOMEReggNOG:COG0515eggNOG:KOG1187EMBL:AK227976
EMBL:CP002685EnsemblPlants:AT2G39110EnsemblPlants:AT2G39110.1entrez:818497
GeneID:818497GO:GO:0004672GO:GO:0005524Gramene:AT2G39110.1
hmmpanther:PTHR27001hmmpanther:PTHR27001:SF29HOGENOM:HOG000116550InterPro:IPR000719
InterPro:IPR001245InterPro:IPR011009InterPro:IPR017441KEGG:ath:AT2G39110
OMA:SSKAMKCPfam:PF07714Pfscan:PS50011PhylomeDB:Q0WSF6
PROSITE:PS00107PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_850311.1
scanprosite:PS00107SMR:Q0WSF6STRING:3702.AT2G39110.1SUPFAM:SSF56112
TAIR:AT2G39110UniGene:At.37210UniProt:Q0WSF6
Coordinates (TAIR10) chr2:+:16319770..16321568
Molecular Weight (calculated) 48885.70 Da
IEP (calculated) 10.07
GRAVY (calculated) -0.37
Length 435 amino acids
Sequence (TAIR10)
(BLAST)
001: MNNSTSVKRL VSSKAMKCFY FSKDKTQDDE AKTRKFGSAT MARGGSGSEF NSDTSTATSI TSSLHVLSET HSNNLKVFVL DDLKTATKNF SRSLMIGEGG
101: FGGVFRGVIQ NPQDSRKKID IAVKQLSRRG LQGHKEWVTE VNVLGVVEHP NLVKLIGYCA EDDERGIQRL LVYEYVQNRS VQDHLSNRFI VTPLPWSTRL
201: KIAQDTARGL AYLHQGMEFQ IIFRDFKSSN ILLDENWNAK LSDFGLARMG PSDGITHVST AVVGTIGYAA PEYIQTGHLT AKSDVWSYGI FLYELITGRR
301: PFDRNRPRNE QNILEWIRPH LSDIKKFKMI IDPRLEGNYY LKSALKLAAV ANRCLMVKAK ARPTMSQVSE MLERIVETSS DGAPSGLPLM KSLTPKDAFE
401: ASRRERVKRR FVELLIGENG CPNLPTWSHK LVTSI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)