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AT2G34310.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.986
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25641898 (2015): plasma membrane
  • PMID:20374526 (2010): plasma membrane
  • PMID:18686298 (2008): plant-type vacuole plant-type vacuole membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29530.1); Has 1236 Blast hits to 680 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 473; Fungi - 0; Plants - 332; Viruses - 0; Other Eukaryotes - 431 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JH8AeggNOG:ENOG4111B74EMBL:AC004481EMBL:AK221518
EMBL:AK228547EMBL:AY085633EMBL:AY136371EMBL:BT000224
EMBL:CP002685EnsemblPlants:AT2G34310EnsemblPlants:AT2G34310.1EnsemblPlants:AT2G34310.2
EnsemblPlants:AT2G34310.3entrez:817992GeneID:817992Gramene:AT2G34310.1
Gramene:AT2G34310.2Gramene:AT2G34310.3hmmpanther:PTHR37187hmmpanther:PTHR37187:SF1
HOGENOM:HOG000115141KEGG:ath:AT2G34310OMA:TDHEENGPhylomeDB:O80780
PIR:T02319Proteomes:UP000006548RefSeq:NP_565783.1RefSeq:NP_850226.1
RefSeq:NP_850227.1STRING:3702.AT2G34310.1TAIR:AT2G34310UniGene:At.43933
UniProt:O80780
Coordinates (TAIR10) chr2:-:14478564..14479812
Molecular Weight (calculated) 26144.90 Da
IEP (calculated) 4.68
GRAVY (calculated) -1.05
Length 242 amino acids
Sequence (TAIR10)
(BLAST)
001: MPPGAKKRKA LKKKQQEQEA TGVATNNKGF NGHGHDEHGS QDERDSDGNL SSPGSQGNEE FGTRDPSPPP LSSLGKDIVK EKAEDADFTG GQVAKGEDVI
101: EVGRGRTDHE ENGVNKQLNS CPENFTQTSR EADSTSSLEI SPALDSVKPM GSSVSKVVMS DKSKQVESST DSDSLQQKSD EKEEILSPRS AEETNKEIKN
201: VKEYEVPECS KEKSLLPSGP PVFRTSWLSC CGLFDVMAGS ER
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)