AT2G32750.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.995 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Exostosin family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: galactosyltransferase 13 (TAIR:AT2G32740.1); Has 675 Blast hits to 673 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4; Plants - 651; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:13889641..13891170 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 59138.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.97 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.25 | ||||||||||||||||||||||||||||||||||||
| Length | 509 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMKPVPKLWV VISSAFVFCL LVLFQINKSD LIEANLQITH QVNNFLISFV ASSNNQILNH TKHANESDGI RAKQLEEEET DTCAGRYIYM YNLPSTFNDD 101: IIKECRPLIK WFDMCPFMVN SGLGPQILVS DKTTARVLTV KTGSWYSTNQ FLLSVIFRER MKHYECLTNN SSLASAIYVP YYAGFDVSRH LWGYNVTVRD 201: ELAIKLAQWL RERPEWGKMY GRDHFFVTGR IGWDFRRFHD EDSDWGSKLM LLPEFSNLTM LGIETTAWAN EFAIPYPTYF HPKSLTEIWR WQKKVKSVKR 301: KYLFSFVGGP RPKLDGSIRG EIIKQCLASH GKCNFLNCFV NDCDNPVKIM KVFENSVFCL QPSGDSYTRR SIFDSILAGC IPVFFSPGSG YNQYIWYFPK 401: DYTKYSVYIP ENEMRNGTVS LKNILGMIAK ERILRMRKEV VKIIPKIIYN KPGFGPEKIE DAFDIAVDRM LERVAMVKRM MEEGKDVQSQ YYSQTKDLKK 501: LEIIHEKTA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)