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AT2G27090.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.987
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:22215637 (2012): plasma membrane
  • PMID:15308754 (2004): plasma membrane
  • PMID:14506206 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF630 and DUF632)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF630 and DUF632); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT4G39790.1); Has 977 Blast hits to 876 proteins in 150 species: Archae - 2; Bacteria - 21; Metazoa - 160; Fungi - 127; Plants - 553; Viruses - 15; Other Eukaryotes - 99 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IEBCeggNOG:ENOG410Y9UREMBL:AC005623EMBL:AK226666
EMBL:BT012583EMBL:CP002685EnsemblPlants:AT2G27090EnsemblPlants:AT2G27090.1
entrez:817251GeneID:817251GO:GO:0005886GO:GO:0009506
Gramene:AT2G27090.1hmmpanther:PTHR21450hmmpanther:PTHR21450:SF6HOGENOM:HOG000242523
InterPro:IPR006867InterPro:IPR006868KEGG:ath:AT2G27090ncoils:Coil
OMA:TLCSNFQPfam:PF04782Pfam:PF04783PhylomeDB:Q9ZVD1
PIR:F84668Proteomes:UP000006548RefSeq:NP_180277.1STRING:3702.AT2G27090.1
TAIR:AT2G27090UniGene:At.38811UniGene:At.68415UniProt:Q9ZVD1
Coordinates (TAIR10) chr2:-:11567691..11570345
Molecular Weight (calculated) 83741.10 Da
IEP (calculated) 6.38
GRAVY (calculated) -0.78
Length 743 amino acids
Sequence (TAIR10)
(BLAST)
001: MGASTSRIDE DKALQLCRER KKFVQQALDG RCLLAAAHVS YVQSLKSTGT ALRKFSETEV PVESSLYTST SATPEQPLAL IEKSVSHLSY SPPPASHSHH
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)