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AT2G21100.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Disease resistance-responsive (dirigent-like protein) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 857 Blast hits to 856 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IY0AeggNOG:ENOG410YZUAEMBL:AC006264EMBL:AK228386
EMBL:BT005788EMBL:BT015116EMBL:CP002685EnsemblPlants:AT2G21100
EnsemblPlants:AT2G21100.1entrez:816645GeneID:816645Genevisible:Q84TH6
GO:GO:0048046Gramene:AT2G21100.1hmmpanther:PTHR21495hmmpanther:PTHR21495:SF80
HOGENOM:HOG000240123InParanoid:Q84TH6InterPro:IPR004265KEGG:ath:AT2G21100
OMA:DSIREMPPaxDb:Q84TH6Pfam:PF03018Pfam:Q84TH6
PhylomeDB:Q84TH6PIR:B84597PRIDE:Q84TH6PRO:PR:Q84TH6
ProteinModelPortal:Q84TH6Proteomes:UP000006548RefSeq:NP_850009.1SMR:Q84TH6
STRING:3702.AT2G21100.1TAIR:AT2G21100UniGene:At.43067UniProt:Q84TH6
Coordinates (TAIR10) chr2:-:9048687..9049336
Molecular Weight (calculated) 20595.10 Da
IEP (calculated) 7.50
GRAVY (calculated) -0.12
Length 187 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKEEYVSRM LVMLIMIMPL VAQGSRLHSW ANRLEETGKD KVTNLQFYFH DTLSGKNPTA VKVAQGTDTE KSPTLFGAVF MVDDALTETA DPKSKLVGRA
101: QGLYGSSCKE EVGLIMAMSF CFEDGPYKDS TISMIGKNSA MNPIREMPIV GGTGMFRMAR GYAIARTNWF DPKTGDAIVG YNVTIMH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)