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AT1G62710.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 1.000
ASURE: vacuole
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : beta vacuolar processing enzyme
Curator
Summary (TAIR10)
Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteases that is expressed specifically in seeds and is essential for the proper processing of storage proteins.
Computational
Description (TAIR10)
beta vacuolar processing enzyme (BETA-VPE); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress, vacuolar protein processing; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: gamma vacuolar processing enzyme (TAIR:AT4G32940.1); Has 785 Blast hits to 783 proteins in 241 species: Archae - 4; Bacteria - 10; Metazoa - 274; Fungi - 115; Plants - 253; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G62710-MONOMEREC:3.4.22.34eggNOG:COG5206eggNOG:KOG1348
EMBL:AC007190EMBL:AF367254EMBL:AY059156EMBL:CP002684
EMBL:D61394EnsemblPlants:AT1G62710EnsemblPlants:AT1G62710.1entrez:842569
GeneID:842569Genevisible:Q39044GO:GO:0000326GO:GO:0004197
GO:GO:0006624GO:GO:0051603Gramene:AT1G62710.1hmmpanther:PTHR12000
hmmpanther:PTHR12000:SF3HOGENOM:HOG000236335InParanoid:Q39044InterPro:IPR001096
KEGG:ath:AT1G62710KO:K01369MEROPS:C13.001OMA:RHRKHLD
PANTHER:PTHR12000PaxDb:Q39044Pfam:PF01650Pfam:Q39044
PhylomeDB:Q39044PIR:C96652PIR:S60050PIRSF:PIRSF019663
PRIDE:Q39044PRINTS:PR00776PRO:PR:Q39044ProteinModelPortal:Q39044
Proteomes:UP000006548RefSeq:NP_176458.1SMR:Q39044STRING:3702.AT1G62710.1
TAIR:AT1G62710tair10-symbols:BETA-VPEtair10-symbols:BETAVPEUniGene:At.16374
UniProt:Q39044
Coordinates (TAIR10) chr1:-:23224070..23226857
Molecular Weight (calculated) 53830.90 Da
IEP (calculated) 6.23
GRAVY (calculated) -0.35
Length 486 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKSCYFRPA LLLLLVLLVH AESRGRFEPK ILMPTEEANP ADQDEDGVGT RWAVLVAGSS GYGNYRHQAD VCHAYQILRK GGLKEENIVV LMYDDIANHP
101: LNPRPGTLIN HPDGDDVYAG VPKDYTGSSV TAANFYAVLL GDQKAVKGGS GKVIASKPND HIFVYYADHG GPGVLGMPNT PHIYAADFIE TLKKKHASGT
201: YKEMVIYVEA CESGSIFEGI MPKDLNIYVT TASNAQESSY GTYCPGMNPS PPSEYITCLG DLYSVAWMED SETHNLKKET IKQQYHTVKM RTSNYNTYSG
301: GSHVMEYGNN SIKSEKLYLY QGFDPATVNL PLNELPVKSK IGVVNQRDAD LLFLWHMYRT SEDGSRKKDD TLKELTETTR HRKHLDASVE LIATILFGPT
401: MNVLNLVREP GLPLVDDWEC LKSMVRVFEE HCGSLTQYGM KHMRAFANVC NNGVSKELME EASTAACGGY SEARYTVHPS ILGYSA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)