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AT1G16705.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.552
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : p300/CBP acetyltransferase-related protein-related
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
p300/CBP acetyltransferase-related protein-related; BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 12 (TAIR:AT1G16710.2); Has 37 Blast hits to 37 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1363-MONOMEReggNOG:COG5076eggNOG:KOG1778EMBL:AY084752
EMBL:BT026095EMBL:CP002684EnsemblPlants:AT1G16705EnsemblPlants:AT1G16705.1
entrez:838241ExpressionAtlas:Q8LFM6GeneID:838241GO:GO:0016740
Gramene:AT1G16705.1Proteomes:UP000006548RefSeq:NP_564004.1STRING:3702.AT1G16705.2
TAIR:AT1G16705UniGene:At.41873UniProt:Q8LFM6
Coordinates (TAIR10) chr1:+:5712469..5713522
Molecular Weight (calculated) 14476.10 Da
IEP (calculated) 5.72
GRAVY (calculated) -0.87
Length 128 amino acids
Sequence (TAIR10)
(BLAST)
001: MDNDVFQIRR SMRDAIFVQL EKRNPLPNDD ASKGKHLDAA KRLEEGLFKM AMTKEEYLNP STLESRLTSL IKGRQLNKYK HQHADSSTLG TTITPTPGVS
101: AEPTMDNENR DQCETEIAEN LKSVSLEP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)