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AT1G15010.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.993
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01300.1); Has 71 Blast hits to 71 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZU1eggNOG:ENOG410YPRJEMBL:AK229029EMBL:AY086396
EMBL:BT006189EMBL:CP002684EnsemblPlants:AT1G15010EnsemblPlants:AT1G15010.1
entrez:838066GeneID:838066GO:GO:0016021GO:GO:0050832
Gramene:AT1G15010.1hmmpanther:PTHR33782hmmpanther:PTHR33782:SF1HOGENOM:HOG000237447
KEGG:ath:AT1G15010OMA:ANYDANIPhylomeDB:Q8LCU9Proteomes:UP000006548
RefSeq:NP_563962.1STRING:3702.AT1G15010.1TAIR:AT1G15010TMHMM:TMhelix
UniGene:At.17008UniProt:Q8LCU9
Coordinates (TAIR10) chr1:+:5171215..5171643
Molecular Weight (calculated) 16460.20 Da
IEP (calculated) 9.33
GRAVY (calculated) 0.10
Length 142 amino acids
Sequence (TAIR10)
(BLAST)
001: MEMILISSST LRFHPLRTSQ RIATGTNRRR TTTVCADYYR GGRTVDENMV VLRKRIHEMK MVERNFEPPS HWMQWEKRFY CNYDATICDA LTLLQTFLMN
101: SRPSVAFGTC LLLLVSVPVS SAVFAFRILD LALWLLDAVH VV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)