AT1G11510.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : DNA-binding storekeeper protein-related transcriptional regulator | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
DNA-binding storekeeper protein-related transcriptional regulator; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT1G61730.1); Has 6244 Blast hits to 2746 proteins in 297 species: Archae - 0; Bacteria - 3717; Metazoa - 876; Fungi - 377; Plants - 483; Viruses - 20; Other Eukaryotes - 771 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:3871778..3872836 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 39232.80 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.33 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.89 | ||||||||||||||||||||||||||||
| Length | 352 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSRRFNPLED PPSASSSDEE GKEIARNSSS DDEDDVSSEN PSPLKTTLDA VSDSESGSDE ETDSDSELEK KKDQVVTNPV DVKRAKKVKT SEKSGAKRSL 101: EVDEAAVSMD VKRAKKVSGE EEKKKSGGGG EETKKTYFQR LWTEDDEIVV LQGLIDDKKD TGVSNTNKVY ELVKKSISFD VSKNQLMEKL RALKKKYENN 201: LGKAKDGVEP TFVKPHDRKA FELSKLVWGG IRMALASGMK SNEKSKKSSK FESVKHELDS SLPNSKNNCE DEVMDEGEVS FTKSSLVRSI VGLGMDELTA 301: QQGLSKLASK DMKRFYEQWK AMQAREFEFF LQKHGFLFEV LSKISEAFGS NA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)