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AT1G10350.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DNAJ heat shock family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G59725.1); Has 27964 Blast hits to 27510 proteins in 3469 species: Archae - 176; Bacteria - 10323; Metazoa - 4622; Fungi - 2603; Plants - 2812; Viruses - 18; Other Eukaryotes - 7410 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0484eggNOG:KOG0714EMBL:AC005489EMBL:AF360252
EMBL:AY040068EMBL:CP002684EnsemblPlants:AT1G10350EnsemblPlants:AT1G10350.1
entrez:837574Gene3D:1.10.287.110GeneID:837574GO:GO:0006457
Gramene:AT1G10350.1hmmpanther:PTHR24078hmmpanther:PTHR24078:SF317InterPro:IPR001623
InterPro:IPR002939InterPro:IPR008971InterPro:IPR018253KEGG:ath:AT1G10350
KO:K09510OMA:NRNANEDPfam:PF00226Pfam:PF01556
Pfscan:PS50076PhylomeDB:Q9SY77PIR:E86237PRINTS:PR00625
PROSITE:PS00636PROSITE:PS50076Proteomes:UP000006548Reactome:R-ATH-3371453
Reactome:R-ATH-3371568Reactome:R-ATH-3371571Reactome:R-ATH-5687128RefSeq:NP_172506.1
scanprosite:PS00636SMART:SM00271SMR:Q9SY77STRING:3702.AT1G10350.1
SUPFAM:SSF46565SUPFAM:SSF49493TAIR:AT1G10350UniGene:At.11287
UniProt:Q9SY77
Coordinates (TAIR10) chr1:-:3393595..3394860
Molecular Weight (calculated) 38758.90 Da
IEP (calculated) 9.83
GRAVY (calculated) -0.80
Length 349 amino acids
Sequence (TAIR10)
(BLAST)
001: MGVDYYNVLK VNRNANEDDL KKSYRRMAMK WHPDKNPTSK KEAEAKFKQI SEAYDVLSDP QRRQIYDQYG EEGLKSTDLP TAAETAAHQQ QRSYSSSNSE
101: FRYYPRDAED IFAEFFGESG DAFGGGSSGR TRGDGGDGGG RRFKSAEAGS QANRKTPPTN KKTTPPANRK APAIESKLAC TLEELYKGAK KKMRISRVVP
201: DDFGKPKTVQ EILKIDIKPG WKKGTKITFP EKGNQEPGVT PADLIFVVDE KPHSVFKRDG NDLILEKKVS LIDALTGLTI SVTTLDGRSL TIPVLDIVKP
301: GQEIVIPNEG MPTKDPLKRG DLRVTFEILF PSRLTSEQKN DLKRVLGGS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)