AT5G59010.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.812 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase protein with tetratricopeptide repeat domain | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT3G54030.1); Has 21140 Blast hits to 20932 proteins in 637 species: Archae - 6; Bacteria - 562; Metazoa - 1681; Fungi - 205; Plants - 18085; Viruses - 31; Other Eukaryotes - 570 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:23820578..23822499 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40134.90 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.29 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||||||||||||||
| Length | 359 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPFETLSKHL FHWDSQPMKW SMRLRVALYL AQALEYCSSK GRALYHDLNA YRILFDQDGN PRLSCFGLMK NSRDGKSYST NLAFTPPEYL RTGRVIPESV 101: VYSFGTLLLD LLSGKHIPPS HALDLIRGKN FLMLMDSCLD GHFSNDDGTD LVRLASRCLQ YEARERPNVK SLVSSLAPLQ KETDIPSHVL MGIPHGAASP 201: KETTSLTPLG DACSRHDLTA IHEILEKVGY KDDEGVANEL SFQVWTDQIQ ETLNSKKQGD AAFKGKDFVT AVECYTQFIE DGTMVSPTVF ARRCLCYLMS 301: NMPQEALGDA MQAQVVSPEW PTAFYLQAAA LFSLGMDKDA CETLKDGTSL EAKKHNNRN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)