AT5G41810.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 514 Blast hits to 437 proteins in 98 species: Archae - 0; Bacteria - 21; Metazoa - 115; Fungi - 53; Plants - 52; Viruses - 5; Other Eukaryotes - 268 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:16738302..16739474 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 31104.70 Da | ||||||||||||||||||||||||
| IEP (calculated) | 9.70 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.94 | ||||||||||||||||||||||||
| Length | 279 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEIKVKAKDV ESTMMSTKEE DEIKKMKECV VIQKADEEVT KGQETMKILD GSRQNQDETR QADSKNIDSP SSSSLEMKKK LEIENTKKEE EKKKETNNNN 101: LSNMKHKKTS SHVWDCGSTL YDSFELNSFK RQLDSAISAS SARTMSMSHL PDRRIPSLSS LSPEYSPPLP PPPTTSSSSS SGGKKHSNKI SRSLQRFLKS 201: MFKPKQHQSL TTPSSPVYKA VGHGGGDKDR YYVVYDKSGS LTTIPESTEK EVSPEINSLV RKTVSERFPA SRVVGISCA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)