AT4G32900.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Peptidyl-tRNA hydrolase II (PTH2) family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Peptidyl-tRNA hydrolase II (PTH2) family protein; FUNCTIONS IN: aminoacyl-tRNA hydrolase activity; INVOLVED IN: translation; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-tRNA hydrolase, PTH2 (InterPro:IPR002833); BEST Arabidopsis thaliana protein match is: Peptidyl-tRNA hydrolase II (PTH2) family protein (TAIR:AT5G16870.1); Has 933 Blast hits to 933 proteins in 345 species: Archae - 258; Bacteria - 52; Metazoa - 200; Fungi - 129; Plants - 88; Viruses - 8; Other Eukaryotes - 198 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:15878944..15880979 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 21080.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.52 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.22 | ||||||||||||||||||||||||||||||||||||
| Length | 193 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MWPSSRNSSQ PQAMRQEKKS ISVSFRAENL IPGVVIGFII GMILDLSQQV TSPVKRSRLL SSKVQKQSSV PGNGKDQELK MVLVVRQDLK MRTGKIASQC 101: AHAATGMYAE LMQSDRYLLR RWEENGQPKI VVTCKNQQEM NKITEAAESV GLPTFVVADA GRTEVAAGSR TVLAVGPGPK ELVDSITGRL ALL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)