AT3G01310.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.992 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Phosphoglycerate mutase-like family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Phosphoglycerate mutase-like family protein; FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, acid phosphatase activity; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-grasp fold, RimK-type (InterPro:IPR013651), Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase-like family protein (TAIR:AT5G15070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:94343..101603 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 118930.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.71 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.48 | ||||||||||||||||||||||||||||||||||||
| Length | 1050 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MEMEEGASGV GEKIKIGVCV MEKKVFSAPM GEILDRLQSF GEFEILHFGD KVILEDPIES WPICDCLIAF HSSGYPLEKA QAYAALRKPF LVNELDPQYL 0101: LHDRRKVYEH LEMYGIPVPR YACVNRKVPN QDLHYFVEEE DFVEVHGERF WKPFVEKPVN GDDHSIMIYY PSSAGGGMKE LFRKIGNRSS EFHPDVRRVR 0201: REGSYIYEEF MATGGTDVKV YTVGPEYAHA EARKSPVVDG VVMRNTDGKE VRYPVLLTPA EKQMAREVCI AFRQAVCGFD LLRSEGCSYV CDVNGWSFVK 0301: NSYKYYDDAA CVLRKMCLDA KAPHLSSTLP PTLPWKVNEP VQSNEGLTRQ GSGIIGTFGQ SEELRCVIAV VRHGDRTPKQ KVKLKVTEEK LLNLMLKYNG 0401: GKPRAETKLK SAVQLQDLLD ATRMLVPRTR PGRESDSDAE DLEHAEKLRQ VKAVLEEGGH FSGIYRKVQL KPLKWVKIPK SDGDGEEERP VEALMVLKYG 0501: GVLTHAGRKQ AEELGRYFRN NMYPGEGTGL LRLHSTYRHD LKIYSSDEGR VQMSAAAFAK GLLDLEGQLT PILVSLVSKD SSMLDGLDNA SIEMEAAKAR 0601: LNEIVTSGTK MIDDDQVSSE DFPWMTDGAG LPPNAHELLR ELVKLTKNVT EQVRLLAMDE DENLTEPYDI IPPYDQAKAL GKTNIDSDRI ASGLPCGSEG 0701: FLLMFARWIK LARDLYNERK DRFDITQIPD VYDSCKYDLL HNSHLDLKGL DELFKVAQLL ADGVIPNEYG INPQQKLKIG SKIARRLMGK ILIDLRNTRE 0801: EALSVAELKE SQEQVLSLSA SQREDRNSQP KLFINSDELR RPGTGDKDED DDKETKYRLD PKYANVKTPE RHVRTRLYFT SESHIHSLMN VLRYCNLDES 0901: LLGEESLICQ NALERLCKTK ELDYMSYIVL RLFENTEVSL EDPKRFRIEL TFSRGADLSP LRNNDDEAET LLREHTLPIM GPERLQEVGS CLSLETMEKM 1001: VRPFAMPAED FPPASTPVGF SGYFSKSAAV LERLVNLFHN YKNSSSNGRS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)