AT1G78800.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.607 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 5 (TAIR:AT5G37180.1); Has 14746 Blast hits to 14703 proteins in 2118 species: Archae - 647; Bacteria - 10061; Metazoa - 282; Fungi - 266; Plants - 467; Viruses - 0; Other Eukaryotes - 3023 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:29625859..29627941 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45030.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.16 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.00 | ||||||||||||||||||||||||||||||||
| Length | 403 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAKKEGSKMN IAIIHPDLGI GGAERLIVDA AVELASHGHK VHIFTSHHDK SRCFEETLSG IFQVTVYGSF LPRHIFYRLH AVCAYLRCLF VALCVLLGWS 101: SFDVVLADQV SVVVPLLKLK RSSKVVFYCH FPDLLLAKHT TTLRRMYRKP IDFIEEQTTG MADMILVNSN FTASTFANTF KRLNAQGSRP AVLYPAVNID 201: QFIEPHTYKL NFLSINRFER KKNIDLAVSA FAILCKHKQN LSDVTLTVAG GYDERLKENV EYLEELRSLA EKEGVSDRVN FITSCSTAER NELLSSCLCV 301: LYTPTDEHFG IVPLEAMAAY KPVIACNSGG PVETVKNGVT GYLCEPTPED FSSAMARFIE NPELANRMGA EARNHVVESF SVKTFGQKLN QYLVDVVSSP 401: KED |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)