AT1G61250.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.435 peroxisome 0.282 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : secretory carrier 3 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a putative secretory carrier membrane protein (SC3). | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
secretory carrier 3 (SC3); FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: Secretory carrier membrane protein (SCAMP) family protein (TAIR:AT1G11180.1). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:22586035..22588519 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 30943.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.54 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.32 | ||||||||||||||||||||||||||||||||
| Length | 274 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MANRYDPNPF AEEEEVNPFA NARGVPPASN SRLSPLPPEP VGFDYGRTVD IPLDRAGTQD LKKKEKELQA KEAELKRREQ DLKRKEDAAA RAGIVIEVKN 101: WPPFFPLIHH DIANEIPVHL QRLQYVTFAT YLGLVLCLFW NIIAVTTAWI KGEGVTIWLL ALIYFIAGVP GGYVLWYRPL YRAFRTDSAL SFGWFFLFYM 201: LHIAFCVFAA VAPPVVFKGK SLAGILPAID VLSGQAIVGI FYFIGFAFFC LESVVSIWVI QVCLFNSHHY IISL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)