AT1G48635.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.995 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : peroxin 3 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
peroxin 3 (PEX3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: peroxisome organization; LOCATED IN: mitochondrion, peroxisome, integral to peroxisomal membrane; CONTAINS InterPro DOMAIN/s: Peroxin-3 (InterPro:IPR006966); BEST Arabidopsis thaliana protein match is: peroxin 3-1 (TAIR:AT3G18160.1); Has 293 Blast hits to 293 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 111; Plants - 49; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:17983951..17985966 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45478.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.44 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||||||
| Length | 400 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDFVRGFWRK HRRKVLVTAG CLGSGYLLYK LYNSHTRRLA DLERELAHER ENDEIIKTQM KAHFESIQMI VDSTTLPHAM QFLSIRISEE IDVSHVMDRL 101: NQGKGMLSPP EKLQLWDELK ILSFTRMVLS LWSVTMLSLY IRVQVNILGR HLYVDTARAL GSSHLLCTLL ISSPTSYFSG KLTGCSVKNF SRLPFKATAA 201: CPEEVDLIDR DDEQKFLSSA DFLVTNAMPS LISDMQGSAE EVLKGKQLKD VITTRVLQET VMQIVDVFMS TGSPHHWVDY LMMPQDTKLS RTTSDSSDEA 301: VSKFHQLMVE TREVLISTEF TNIVEISLKC FTDVLVEEME TQTEAGGLAT GKPLAKVLPQ IEKTMNVITA EPSKNRFLQI IRDLPEVKLF FTLLYANMPQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)