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AT1G48635.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
ASURE: peroxisome
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : peroxin 3
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
peroxin 3 (PEX3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: peroxisome organization; LOCATED IN: mitochondrion, peroxisome, integral to peroxisomal membrane; CONTAINS InterPro DOMAIN/s: Peroxin-3 (InterPro:IPR006966); BEST Arabidopsis thaliana protein match is: peroxin 3-1 (TAIR:AT3G18160.1); Has 302 Blast hits to 302 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 120; Fungi - 122; Plants - 49; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Protein Annotations
EMBL:AC074308EMBL:AK175341EMBL:AY074860EMBL:AY124818EMBL:CP002684EnsemblPlants:AT1G48635EnsemblPlants:AT1G48635.1
entrez:841285ExpressionAtlas:Q8S9K7GeneID:841285GO:GO:0005779GO:GO:0007031GO:GO:0015031hmmpanther:PTHR28080
hmmpanther:PTHR28080:SF1HOGENOM:HOG000030399InterPro:IPR006966ncoils:CoilPfam:PF04882Pfam:Q8S9K7PhylomeDB:Q8S9K7
PRIDE:Q8S9K7PRO:PR:Q8S9K7ProteinModelPortal:Q8S9K7Proteomes:UP000006548Reactome:R-ATH-1369062RefSeq:NP_683410.1SMR:Q8S9K7
TAIR:AT1G48635tair10-symbols:PEX3tair10-symbols:PEX3-2UniGene:At.18897UniProt:Q8S9K7
Coordinates (TAIR10) chr1:+:17983951..17985966
Molecular Weight (calculated) 41698.70 Da
IEP (calculated) 5.80
GRAVY (calculated) -0.13
Length 364 amino acids
Sequence (TAIR10)
(BLAST)
001: MDFVRGFWRK HRRKVLVTAG CLGSGYLLYK LYNSHTRRLA DLERELAHER ENDEIIKTQM KAHFESIQMI VDSTTLPHAM QFLSIRISEE IDVSHVMDRL
101: NQGKGMLSPP EKLQLWDELK ILSFTRMVLS LWSVTMLSLY IRVQVNILGR HLYVDTARAL GSSHLLEEVD LIDRDDEQKF LSSADFLVTN AMPSLISDMQ
201: GSAEEVLKGK QLKDVITTRV LQETVMQIVD VFMSTGSPHH WVDYLMMPQD TKLSRTTSDS SDEAVSKFHQ LMVETREVLI STEFTNIVEI SLKCFTDVLV
301: EEMETQTEAG GLATGKPLAK VLPQIEKTMN VITAEPSKNR FLQIIRDLPE VKLFFTLLYA NMPQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)