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AT5G67050.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 0.543
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31975158 (2020): plastid
  • PMID:24872594 (2014): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: membrane; EXPRESSED IN: sepal, carpel, stamen, leaf; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G42930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IQ36eggNOG:ENOG4111WA2EMBL:CP002688EnsemblPlants:AT5G67050
EnsemblPlants:AT5G67050.1entrez:836840Gene3D:3.40.50.1820GeneID:836840
GO:GO:0006629GO:GO:0016020GO:GO:0016787Gramene:AT5G67050.1
gramene_pathway:3.1.1.3gramene_pathway:LIPAS-PWYhmmpanther:PTHR21493hmmpanther:PTHR21493:SF142
InParanoid:F4K280InterPro:IPR002921InterPro:IPR029058KEGG:ath:AT5G67050
OMA:ELRPWELPaxDb:F4K280Pfam:PF01764PRIDE:F4K280
ProteinModelPortal:F4K280Proteomes:UP000006548RefSeq:NP_201506.2SMR:F4K280
STRING:3702.AT5G67050.1SUPFAM:SSF53474TAIR:AT5G67050UniGene:At.50564
UniProt:F4K280
Coordinates (TAIR10) chr5:-:26759482..26761165
Molecular Weight (calculated) 55183.90 Da
IEP (calculated) 6.00
GRAVY (calculated) -0.29
Length 477 amino acids
Sequence (TAIR10)
(BLAST)
001: MMNSDDDDEP RGYLILRPEE LRPWELVRLL FSGDIEKPRS VDSSETEEHS FRHRWLIFVS LVLLKLLRFF SKLLALVGSA LEFSLNFLSN NSFSGLFLRG
101: EVVMPQRTSE NYQSFIGHLD TRVSLDMTLN REDGEKYYAA LSIMASKIAY ENAARIKHVV ENHWNMKYLG LVDYWNEYQE KETTQAFIMS TDETTTRSNG
201: QETTVVVAFR GTELFNSEDW CSDFDITWFE LPNIGNIHGG FMKALGLQNN CSWPKEPLSN PDRKSPLAYY SIRDSLKTLI AQNKNTKFVL TGHSLGGALA
301: ILFTAVLVIH HETELLERIQ GVYTYGQPRV GDSKFGEFME KKLEKYNIKY YRFVYNNDIV PRLPYDDKDL MFKHFGTCIY YDQNYQAKVM REQSDENFFL
401: LRGIIKMMWS AILEFIRSFT IVAEKGSEYS EGWLLKGGRA LGIIVPGVSN HTPQDYVNAT RLTLPCVFQV YRDVSIT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)