AT5G51420.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.969 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein; BEST Arabidopsis thaliana protein match is: MBOAT (membrane bound O-acyl transferase) family protein (TAIR:AT5G55350.1); Has 429 Blast hits to 418 proteins in 114 species: Archae - 0; Bacteria - 193; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr5:-:20885419..20886726 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 51289.40 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.81 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.69 | ||||||||||||||||||||||||||||||||||||
| Length | 435 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEELKNLIK VSVSVIISIS YCYYVPTRIK PGIFRFLSVL PICALFRVLP LFFASVHLSG YTALFISWLA NFKLILFSFN QGPLFPLPSN LTRFICFACF 101: PIKLQQNPKR RDYFFQWEYP IEVLFSNQFV TKVVILSVVL HMYNHIQHIY PIVLFVLYPL HLYLVLEILL KLFNAFFSIA LDCELEPQLN EPYLAYSLRD 201: FWGHWWTLML PTILLPDVYA RMRRITEGKM NSENALYLGV FVTFLVSGAL HEFLFFYITR ERPTGEVTLF FVLHGVCIVA YDARLKKKIA RWIGFEFCPC 301: LILQVMVMGF VVVTAGWLFF PPLVRTGKIQ RFANEALLFI GFVRNLFNES LFFMRKFFNE ALFFTGFVMR KLFNGALFFI GFVKLKLFNE SSLFFIMRKL 401: FNEAMFFIGF VIRKLFNEAM FFIGFVKLKL FTFGW |
||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)