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AT5G45120.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.991
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Eukaryotic aspartyl protease family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G16563.1); Has 2287 Blast hits to 2274 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 209; Fungi - 201; Plants - 1822; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G45120-MONOMEReggNOG:ENOG410XNV7eggNOG:KOG1339EMBL:AB019224
EMBL:CP002688EnsemblPlants:AT5G45120EnsemblPlants:AT5G45120.1entrez:834548
Gene3D:2.40.70.10GeneID:834548GO:GO:0003677GO:GO:0004190
Gramene:AT5G45120.1hmmpanther:PTHR13683hmmpanther:PTHR13683:SF264HOGENOM:HOG000237482
InterPro:IPR001461InterPro:IPR001969InterPro:IPR021109InterPro:IPR032799
InterPro:IPR032861InterPro:IPR033121KEGG:ath:AT5G45120MEROPS:A01.A60
OMA:FSHCFLPPANTHER:PTHR13683Pfam:PF14541Pfam:PF14543
Pfscan:PS51767PhylomeDB:Q9FHE2PRINTS:PR00792PROSITE:PS00141
PROSITE:PS51767Proteomes:UP000006548RefSeq:NP_199325.1scanprosite:PS00141
SMR:Q9FHE2STRING:3702.AT5G45120.1SUPFAM:SSF50630TAIR:AT5G45120
UniGene:At.55379UniProt:Q9FHE2
Coordinates (TAIR10) chr5:+:18241003..18242478
Molecular Weight (calculated) 53751.20 Da
IEP (calculated) 5.39
GRAVY (calculated) -0.03
Length 491 amino acids
Sequence (TAIR10)
(BLAST)
001: METQTHVLFL FLLITLLLNT TNKTQARQHK NPSSSSSSFL VLTLTKSSVS LPTPKSQTQE RIKKPLSSVD VVMEPLREVR DGYLITLNIG TPPQAVQVYL
101: DTGSDLTWVP CGNLSFDCIE CYDLKNNDLK SPSVFSPLHS STSFRDSCAS SFCVEIHSSD NPFDPCAVAG CSVSMLLKST CVRPCPSFAY TYGEGGLISG
201: ILTRDILKAR TRDVPRFSFG CVTSTYREPI GIAGFGRGLL SLPSQLGFLE KGFSHCFLPF KFVNNPNISS PLILGASALS INLTDSLQFT PMLNTPMYPN
301: SYYIGLESIT IGTNITPTQV PLTLRQFDSQ GNGGMLVDSG TTYTHLPEPF YSQLLTTLQS TITYPRATET ESRTGFDLCY KVPCPNNNLT SLENDVMMIF
401: PSITFHFLNN ATLLLPQGNS FYAMSAPSDG SVVQCLLFQN MEDGDYGPAG VFGSFQQQNV KVVYDLEKER IGFQAMDCVL EAASHGLNQG S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)