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AT5G26100.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JUDWeggNOG:ENOG41106YVEMBL:CP002688EnsemblPlants:AT5G26100EnsemblPlants:AT5G26100.1entrez:832679GeneID:832679
Gramene:AT5G26100.1HOGENOM:HOG000131644InParanoid:Q3E938KEGG:ath:AT5G26100OMA:REGLLMKPaxDb:Q3E938PhylomeDB:Q3E938
PRIDE:Q3E938Proteomes:UP000006548RefSeq:NP_197982.1TAIR:AT5G26100UniGene:At.65550UniProt:Q3E938
Coordinates (TAIR10) chr5:-:9117290..9117817
Molecular Weight (calculated) 20186.40 Da
IEP (calculated) 8.94
GRAVY (calculated) -0.34
Length 175 amino acids
Sequence (TAIR10)
(BLAST)
001: MENKLVLGAL CIYLVLQGTC GEENNPLINH YADYETIHPS EYYSSDFELK DGTNVIFEAI NELKGIKKPK AGFMCNYGKK QWTRSLPGDI FYAKFFFYSI
101: NPNAKVVQHC HFRSNLGYVD AYIKITPALG RTCPGYRCVL AVRREGLLMK DTNELFPWTP WPRRHIQPKL PKITN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)