AT5G18510.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.775 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Aminotransferase-like, plant mobile domain family protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Aminotransferase-like, plant mobile domain family protein; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G50830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:6141778..6143886 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 80556.60 Da | ||||||||||||||||||||||||
| IEP (calculated) | 7.93 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.55 | ||||||||||||||||||||||||
| Length | 702 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVCLCEEGRC LRKTHFLKPF STSIDGSVAE LPRLDDQQRL SDSSLHNTSS GFWAADHHFF LSWLGKMQAL YEPIWKKAGI FEAIKASTYK IIKDTSSILS 101: IAEKWCSETK SFIFPWGEAT ITLEDVMVLL GFSVLGSPVF SPLECSEMRD SAEKLEKVRR DSLGKAKRVS QRSWTSSFMG RGGQMEHEAF LVLWLSLFVF 201: PGKFCRSIST NVIPIAVRLA RGERIALAPA VLAFLYKDLD RICDFSRGKC AGKVNLKSLF KLVQVWTWER FSNIRPKAKE IPKGEPRIAQ WDGLQQISKN 301: VKLSFDVFEW RPYTKPLKNW NPLRFYVDEA MWLTVDDSVD DAFASFARCV KVSYLAGNGF VEDYFPYRVA RQFGLSQDLP GLVTRRRKIT EKDAWDDYSN 401: SLEGLNLYLP SQLDRGYVTA RYQDWWFKSA SEYFGSEEIQ KESTEAFDAR NTFDHLDKDD DDGDIDVSTK VPPLSQVVQK LEEGFTAKRR ISRMHRSAKR 501: YKITESDVHM KRAREADAEI STDKEDDCMT VAQLIRSRNK YFSDVDKKTG GDASESLGKR SRRYMLVDSD DDSGPCQKHA LMKVEQRSVE DDGTTKKTEI 601: TRQTCDDVNG SDAEKKAIIN DGIKEADSWL LEDREIERRC IGKFCSEVKK EEDVDERLRQ RTLAIEKMAL ELETRLSKME KSLAEIRKWK TRGNQTKNGF 701: SA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)