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AT4G26250.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : galactinol synthase 6
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
galactinol synthase 6 (GolS6); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 5 (TAIR:AT5G23790.1); Has 1309 Blast hits to 1308 proteins in 306 species: Archae - 0; Bacteria - 175; Metazoa - 257; Fungi - 268; Plants - 476; Viruses - 67; Other Eukaryotes - 66 (source: NCBI BLink).
Protein Annotations
CAZy:GT8EC:2.4.1.123eggNOG:COG5597eggNOG:KOG1950EMBL:AL049171EMBL:AL161564EMBL:AY142500
EMBL:CP002687EnsemblPlants:AT4G26250EnsemblPlants:AT4G26250.1entrez:828731Gene3D:3.90.550.10GeneID:828731Genevisible:Q8H1S1
GO:GO:0005737GO:GO:0006012GO:GO:0046872GO:GO:0047216Gramene:AT4G26250.1gramene_pathway:2.4.1.123gramene_pathway:PWY-5337
gramene_plant_reactome:1119417gramene_plant_reactome:6874015hmmpanther:PTHR11183hmmpanther:PTHR11183:SF33HOGENOM:HOG000240012InParanoid:Q8H1S1InterPro:IPR002495
InterPro:IPR029044InterPro:IPR030515KEGG:00052+2.4.1.123KEGG:ath:AT4G26250KO:K18819OMA:WWIDANGPANTHER:PTHR11183:SF33
PaxDb:Q8H1S1PaxDb:W8PV51Pfam:PF01501Pfam:Q8H1S1PhylomeDB:Q8H1S1PIR:T06009PRO:PR:Q8H1S1
ProteinModelPortal:Q8H1S1Proteomes:UP000006548RefSeq:NP_567741.2SMR:Q8H1S1STRING:3702.AT4G26250.1SUPFAM:SSF53448TAIR:AT4G26250
tair10-symbols:AtGolS6tair10-symbols:GolS6UniGene:At.32197UniProt:Q8H1S1UniProt:W8PV51
Coordinates (TAIR10) chr4:+:13289641..13291053
Molecular Weight (calculated) 38852.60 Da
IEP (calculated) 4.83
GRAVY (calculated) -0.19
Length 336 amino acids
Sequence (TAIR10)
(BLAST)
001: MAQMSMTVEK SIKADVTVSH DRVKRAYVTF LAGNKDYWMG VVGLAKGLRK VKSAYPLVVA ILPDVPEEHR QILLAQGCII REIEPVYPPE NKTGYSMAYY
101: VINYSKLRIW EFVEYEKMIY LDGDIQVFSN IDHLFDTPRG YLYAVKDCFC EISWSKTPQF KIGYCQQCPE KVTWPVESLG SPPPVYFNAG MLVFEPNLLT
201: YEDLLRVVQI TTPTYFAEQD FLNEYFTDIY KPIPSTYNLV MAMLWRHPEH IDLDQISVIH YCANGSKPWR FDETEEHMDR EDIKMLVKKW WDIYEDSSLD
301: YKNFVETESK LSPINATLAS KESVGDVLIS LAPSAA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)