AT4G11930.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.680 What is SUBAcon? |
|||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||
| Description (TAIR10) | protein_coding : | ||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11940.1); Has 102 Blast hits to 102 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||
| Coordinates (TAIR10) | chr4:+:7164904..7165722 | ||||||||||||||||||||
| Molecular Weight (calculated) | 30188.50 Da | ||||||||||||||||||||
| IEP (calculated) | 4.48 | ||||||||||||||||||||
| GRAVY (calculated) | -0.55 | ||||||||||||||||||||
| Length | 272 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSGERALHL TTPDDEAIRT CHLLLRFGDF RGVRDIVNTN KAVISERLDT FEKAAAISDV LSAAETPLPN GATDWYGIIR MKQPGPIVGE DFEKLMNLLN 101: SSNNPFPFCQ EARVKASLAW SFLSDPTSKA KYDKSISSED NLVIEDQTGD ITDGVPLCGE GSEGEVDTRK RKAESLIFSD LPALENLKEF QETEESPLPV 201: EEKNNEVPSK DTSFVPEKRN VGPGPDDEVV VISDDEDEEY VGRDIISMAR TAKVRIVDGR KVKFVPLRKK QK |
||||||||||||||||||||
| See Also |
|
||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)