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AT3G58770.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 38 Blast hits to 36 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J74CeggNOG:ENOG410YV8CEMBL:AL353032EMBL:CP002686EnsemblPlants:AT3G58770EnsemblPlants:AT3G58770.1entrez:825046
GeneID:825046Gramene:AT3G58770.1KEGG:ath:AT3G58770OMA:WSHELASPIR:T49160Proteomes:UP000006548RefSeq:NP_191436.1
STRING:3702.AT3G58770.1TAIR:AT3G58770UniProt:Q9LXS4
Coordinates (TAIR10) chr3:+:21732520..21735183
Molecular Weight (calculated) 86081.80 Da
IEP (calculated) 8.92
GRAVY (calculated) -0.57
Length 771 amino acids
Sequence (TAIR10)
(BLAST)
001: MEVDYGGFSI REYTEKVRSD NERKCWPFAG DLIQSFLPPI TVSKFRWWSH ELASLLTKSP VSVDDSDPSF RRKAKAKTRQ CKKRSIVEIC ATAPKIQLAE
101: DYVVHKKKIK TTKSKDSGDR EFTNKVNQCK EQKVDDIGKC SLGIKESSGV MSLSSKKAGL VSKDHDSEFQ IPAIFKAKRK VCFARSPDKS KTHVRFSDQS
201: GNLSQLEKST VSLQLCCLEM NRLSLSENLS QRKNQSSVND KQLKVMSTDQ TSTVMHLETR QQYKFQPAVS KSHLSCFLGP HLSSQERVTD ALDLERKEYV
301: AQAIQSFIST SSETPYRACP SFSQPVSADM HRGTLLYQSP FDPLPTEWMQ KSVLNRQRHV GEAILGFPLD LQGDLVDANG ETCRSFDRSG LCTSFSKSAS
401: TGNDLLLGNL VEFSSEKKHL IEAALAKDNA PLNEKRHKYF PARLGLDETF TEKAYLTNTN DGECGYTPVS EVNPRSHAIN MSKRNGVKQN LNSGKVILKR
501: DDLCLQNTQA TMRLMGKDVS VSTSYSGMIR TGERIIGPDA SIDYSSLGTY THQSWVCQRT TLEVSENHST TILDKNWNKA LLRDTSKDPF PLFCEPLVSL
601: ASQSRAYAVP DSEFPSTILN PCCSLASFPL SEKNLNFHGS GLGPPNSFTL SQQQLPFPYD YNNVDIGLLP DARKRSFGLP LSSTNSARRS QTPWAQSSSE
701: NSCSELSFVN PSEQLTSFYG SRLSSSINVG TTNKRVAPVE EYPMKNHKVP KLLPMQGGLN YVKEFLCRPA N
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)