AT3G44250.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.948 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 71, subfamily B, polypeptide 38 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
putative cytochrome P450 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 71, subfamily B, polypeptide 38 (CYP71B38); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome p450 71b5 (TAIR:AT3G53280.1); Has 32929 Blast hits to 32671 proteins in 1674 species: Archae - 48; Bacteria - 3051; Metazoa - 12123; Fungi - 6922; Plants - 9690; Viruses - 3; Other Eukaryotes - 1092 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:15948505..15950224 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 56782.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.67 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.07 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 499 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSIFLCFLLL LPLSLILFKK LLPSKGKLPP GPIGLPIIGN LHQLGKLLYK SFHKISQEYG PVVLLRLGVV PVIVVSSKEG AEEVLKTHDL ETCTRPKTAA 101: TGLFTYNFKD IGFAPFGDDW REMRKITTLE LFSVKKLKSF RYIREEESEL LVKKISKSVD ETQNSSVDLR KVLFSFTASI ICRLAFGQNF HQCDFVDASL 201: EELVLESEAN LGTFAFADFF PGGWLIDRIS GQHSRVNKAF YKLTNFYKHV IDDHLKTGQP QDHSDIVSVM LDMINKPTKA DSFKVTYDHL KGVMSDIFLA 301: GVNGGANTMI WTLTELSRHP RVMKKLQEEI RAMLGPNKER ITEEDLEKVE YLKLVMVETF RLHPPAPLLL PRLTMSDIKI QGYNIPKNTM IQINTYAIGR 401: DPKYWKQPGE FIPERFLDSP IDYKGQHFEL LPFGAGRRIC PGMATGITMV ELGLLNLLYF FDWSLPNGMT IEDIDMEEDE GFAIAKKVPL VLIQTSHRW |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)