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AT3G42130.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.909
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glycine-rich protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
glycine-rich protein; Has 7285 Blast hits to 2812 proteins in 355 species: Archae - 0; Bacteria - 809; Metazoa - 3330; Fungi - 364; Plants - 2055; Viruses - 51; Other Eukaryotes - 676 (source: NCBI BLink).
Protein Annotations
EMBL:AL356013EMBL:CP002686EnsemblPlants:AT3G42130EnsemblPlants:AT3G42130.1entrez:823185GeneID:823185Gramene:AT3G42130.1
KEGG:ath:AT3G42130PIR:T48968Proteomes:UP000006548RefSeq:NP_189799.1TAIR:AT3G42130UniGene:At.64614UniProt:Q9LX57
Coordinates (TAIR10) chr3:-:14298241..14298883
Molecular Weight (calculated) 6300.27 Da
IEP (calculated) 9.88
GRAVY (calculated) -0.96
Length 65 amino acids
Sequence (TAIR10)
(BLAST)
1: MSIITGDLIN RGGGEACDGG GGRYRKGGGN VYGGGGGYER HSRGYRSGGG CGGKRYGGGG REGGG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)