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AT3G30320.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.621
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 15 Blast hits to 13 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:CP002686EnsemblPlants:AT3G30320EnsemblPlants:AT3G30320.1entrez:822732
GeneID:822732Gramene:AT3G30320.1KEGG:ath:AT3G30320PaxDb:F4J5G5
PRIDE:F4J5G5Proteomes:UP000006548RefSeq:NP_189651.1TAIR:AT3G30320
UniGene:At.53596UniProt:F4J5G5
Coordinates (TAIR10) chr3:+:11931287..11934694
Molecular Weight (calculated) 78948.20 Da
IEP (calculated) 9.41
GRAVY (calculated) -0.35
Length 695 amino acids
Sequence (TAIR10)
(BLAST)
001: MLLKFWGVTG IVTPCFQEYG GACGEVSKND LDTYVIKVHL SFWSNILGWV TFREVIVGTM GDRCVTSGLE SNLDECGVKK DHTIGGDGLG AQRGRYEQGM
101: ANTPKQSELE ARVGADTPLA HETAGQTEAR REQEITALRE NILSMNAMVQ QMYSCICGEP TNDGKASASS DPTRTDRVLT FANPKPIEFL LPPPPLAEEK
201: TLELQQTQES NVDVLLPKEN SKISLRNFVE QVVGARSQRL SREYGIYKGL SATQKLRLRR SHVSEVTTRL EKRKMKKNHR SQSLHLAFRV RSPRNQLYLG
301: EDRFNSMAVN LAKEKQHTGS RRAQSGENSS HSFTFPPLNQ LSVSADSVLS HADTKFTVDE ESFECSLAKQ VWKPERLCHG EKVQALAFQD GTLHFSFGLV
401: NHVWEPGENL DVVLRNPINC CEDYLFEKYV TGVLQTVYQG KRRPIGSWIT ELGVMRLLQR VPLMRFQEII SMFKEFGFPV QGQLRYFVKG LTLALQTGVD
501: VKFVLDSVNC NHVWKPVGIL VNGTYMSHKL RVVDEFLERQ ILSSVMDLLV GSELCVYAYL VKASSEGSNM NLRTTKMNRQ LELSTHGPAV EGVRRFKALL
601: LRILVKRPRG VRPKQDWWRF LQKLIILNHV PDDEARTRKQ EYKVSAFPHQ IERFLPIHLE DKVYFSRASS NRCGWLVFDR GKKNRILGYV MSIVI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)