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AT3G27410.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 10 Blast hits to 10 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JW5VeggNOG:ENOG411058REMBL:AB024028EMBL:CP002686
EMBL:DQ056611EnsemblPlants:AT3G27410EnsemblPlants:AT3G27410.1entrez:822362
GeneID:822362GO:GO:0031225Gramene:AT3G27410.1HOGENOM:HOG000153112
KEGG:ath:AT3G27410OMA:ADNKPTVProteomes:UP000006548RefSeq:NP_189377.1
TAIR:AT3G27410TMHMM:TMhelixUniGene:At.49631UniProt:Q9LTY9
Coordinates (TAIR10) chr3:-:10145244..10145642
Molecular Weight (calculated) 13780.00 Da
IEP (calculated) 4.04
GRAVY (calculated) 0.11
Length 132 amino acids
Sequence (TAIR10)
(BLAST)
001: MASHFFLVFI FVILTVANGI SAADSEKSQS PSSSKTLADN KPTVDNSTKS LIDSLGPSQD YPDYEIPLEL APDGVVVVGD YAPISPRGTP DTLAQSEADQ
101: DVKTSTSSSA SRSSSTVLAI VVVMGGASLF FF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)