AT3G23460.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.883 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: lipid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23510.1); Has 8129 Blast hits to 5802 proteins in 1165 species: Archae - 0; Bacteria - 4586; Metazoa - 5; Fungi - 83; Plants - 178; Viruses - 0; Other Eukaryotes - 3277 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:8412319..8414319 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35571.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.65 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||
| Length | 305 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVTPMSNRKH MVMSLIEKAA RFFFTRFLTH FISTGCVTIF EGGNMVTFEG KDSRCHLKSE LEIHSPQFYW KVMTQVDLGL ADAYINGDFS FVNKETGLLN 101: LIMILIASKE LNSNLAEKRG RWTPIFLTTG LSSAKHFLKH LYRQNNLTQA RRNISRHYDL SNELFTIFLD DTMSYSSGVF KSDDEELKIA QMRKIYLLIE 201: KTAYLSCSIE NVENIGIHYY QTLRLWRKNF FERQKQITDL GFDDRFVRTC EYYFDYCAAG FKTRTVGDYQ IVFSRPGNVI ALGDDSFYSS PLTQKKQLQM 301: NHFDS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)