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AT3G15910.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

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SUBAcon:
cytosol 0.863
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 12 Blast hits to 12 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:CP002686EnsemblPlants:AT3G15910EnsemblPlants:AT3G15910.1entrez:820834GeneID:820834Gramene:AT3G15910.1InParanoid:F4J048
iPTMnet:F4J048KEGG:ath:AT3G15910OMA:KYRHACIPaxDb:F4J048PRIDE:F4J048Proteomes:UP000006548RefSeq:NP_188212.1
TAIR:AT3G15910UniGene:At.50836UniProt:F4J048
Coordinates (TAIR10) chr3:+:5382061..5383069
Molecular Weight (calculated) 35812.60 Da
IEP (calculated) 9.48
GRAVY (calculated) -0.34
Length 307 amino acids
Sequence (TAIR10)
(BLAST)
001: MRWTSIPETH REFSILPIGL SRNGSKGKYY VVKLTATTPS QLKVYVVDSK RGQRKFYCIE HPPWSESGWW PTQCQAVNFN KALHWLAHDG PIVAYNPKYR
101: HACIIIHRSQ EMHHASHGHG AVVSETLTVS MGHLRIIQLV CYPFPNDHHH LSIWTLVDYE QSLWKKEHDS VYFRDMVSGI PWIQDYMRQY NLETTKQMSF
201: LMAVFMDKRA PPETRKRIIF PHPLLCHPNN PLLVYLYLPE SIVSLDVATK KLQLITKDIK RGTCPKVGRY ESGYDMVIPM TLHLEPSLLS DHERVLLPCH
301: KRTHVVR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)