AT3G04900.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.950 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Heavy metal transport/detoxification superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT3G06130.2); Has 240 Blast hits to 236 proteins in 32 species: Archae - 0; Bacteria - 3; Metazoa - 26; Fungi - 6; Plants - 201; Viruses - 1; Other Eukaryotes - 3 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:1349302..1349928 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 23044.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.75 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.38 | ||||||||||||||||||||||||||||
| Length | 208 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEDLDFPICI LKMNLQCCED FPSRVKKLLR QVKGVYAITI DPVKGLILVC GTAEPSVLIK AVAKLGQSPQ LYAYEKDPAT AKTRFRTLLK RYATNKTQDK 101: PSPPAPPVTA TTPVETCPAG GETFRGFGYP GPTTMMQMPA FSLPPPRGLP GWLAPPTNPR LKYEEPKVTP RKPPAPYPFD YYENLGFPPS DSLFNYFSDD 201: NPQPCSIM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)